Protein or peptide name: | Ssr1169 |
Chromosome: | Synechocystis sp. PCC 6803, complete genome |
Protein or peptide start site: | 3081689 |
Protein or peptide end site: | 3081850 |
ncRNA start site: | 3081689 |
ncRNA end site: | 3081850 |
Genome Browser: | NA |
Protein or peptide sequence: | MDIVKIICAILLPPLGVFLQVGIGKDFWINLLLTIFGLYILGLVHAIWVIARER |
Protein or peptide length: | 54aa |
ncRNA type: | ncRNA |
ncRNA name: | ssr1169 |
Entrez ID: | 12254832 |
Experimental species: | Cyanobacteria |
Experimental techniques: | Western blotting |
Experimental sample (cell line and/or tissue): | Synechocystis sp. PCC 6803 |
Description: | To verify the existence of the respective μ-proteins in vivo, we selected five genes as examples to which a FLAG tag sequence was added and re-introduced them into Synechocystis sp. PCC 6803. These were the previously annotated gene ssr1169, two newly defined genes norf1 and norf4, as well as nsiR6 (nitrogen stress-induced RNA 6) and hliR1(high light-inducible RNA 1), which originally were considered non-coding. |
Subcellular location: | NA |
Function: | Ssr1169 homologs possess two transmembrane helices that form a Pmp3 domain and might be a stress induced proteolipid membrane modulator. |
Title of paper: | Small proteins in cyanobacteria provide a paradigm for the functional analysis of the bacterial micro-proteome |
PMID: | 27894276 |
Year of publication: | 2016 |